**************************************** * * * BioProspector Search Result * * * **************************************** Read input sequences. Look for motifs from the original sequences. Try #1 1.463 GGGAGAAAAG CTTTTCTCCC 4 Try #2 2.267 GGAGGAGTGT ACACTCCTCC 9 Try #3 1.705 GGTAGAATCT AGATTCTACC 5 Try #4 2.127 GGACGAGAGT ACTCTCGTCC 9 Try #5 1.917 TGGATATGTA TACATATCCA 6 Try #6 2.268 ACATATCCAC GTGGATATGT 9 Try #7 1.887 AATGTATAGA TCTATACATT 8 Try #8 1.946 ACGAATCGCA TGCGATTCGT 8 Try #9 1.623 ATTACTTTTT AAAAAGTAAT 6 Try #10 1.914 CTTCCTATGG CCATAGGAAG 9 Try #11 1.990 GAGAAGGCGA TCGCCTTCTC 7 Try #12 2.345 CTGCGCCGAT ATCGGCGCAG 12 Try #13 1.936 ACGACGCACA TGTGCGTCGT 8 Try #14 2.015 ACATTTCCAT ATGGAAATGT 7 Try #15 1.680 CTATACTAGC GCTAGTATAG 6 Try #16 2.256 CGGAGCAGTG CACTGCTCCG 9 Try #17 2.390 CTCTCCTCCG CGGAGGAGAG 10 Try #18 2.419 CGGAGCACTG CAGTGCTCCG 12 Try #19 2.126 CAGTGATCCG CGGATCACTG 8 Try #20 2.268 ACATATCCAC GTGGATATGT 9 Try #21 1.649 AATATGCTTG CAAGCATATT 6 Try #22 1.882 TTGTTAATAT ATATTAACAA 8 Try #23 2.159 CGCCGCACTG CAGTGCGGCG 7 Try #24 2.268 ACATATCCAC GTGGATATGT 9 Try #25 1.659 GATTCTACAA TTGTAGAATC 6 Try #26 1.542 TAGTATTGGT ACCAATACTA 5 Try #27 2.366 CAGTCCTCCG CGGAGGACTG 10 Try #28 2.332 CGGAGCACTG CAGTGCTCCG 9 Try #29 2.123 CCAGTGCGTC GACGCACTGG 9 Try #30 2.376 CGGAGCACTG CAGTGCTCCG 11 Try #31 2.316 CGGACGAGAG CTCTCGTCCG 12 Try #32 1.574 AATCAAATTA TAATTTGATT 6 Try #33 1.718 GTCTTACTTA TAAGTAAGAC 7 Try #34 1.960 CGAGGCACAT ATGTGCCTCG 7 Try #35 1.882 ATATACATAT ATATGTATAT 9 Try #36 1.645 CAAGCTAAAA TTTTAGCTTG 6 Try #37 2.103 GACCGCCCTC GAGGGCGGTC 9 Try #38 1.824 GCAGTGCGGC GCCGCACTGC 5 Try #39 1.695 TGATTAGTTA TAACTAATCA 6 Try #40 1.772 GATTCTACCG CGGTAGAATC 6 The highest scoring 3 motifs are: Motif #1: (CGGAGCACTG/CAGTGCTCCG) ****************************** Width (10, 0); Gap [0, 0]; MotifScore 2.419; Segments 12 Blk1 A C G T Con rCon Deg rDeg 1 0.02 0.87 0.01 0.10 C G C G 2 0.02 0.01 0.95 0.02 G C G C 3 0.10 0.01 0.87 0.02 G C G C 4 0.88 0.09 0.01 0.02 A T A T 5 0.25 0.09 0.56 0.10 G C R Y 6 0.10 0.40 0.40 0.10 C G S S 7 0.80 0.01 0.17 0.02 A T A T 8 0.02 0.71 0.25 0.02 C G C G 9 0.02 0.01 0.01 0.95 T A T A 10 0.02 0.40 0.56 0.02 G C S S >1 YBR018C GAL7 275483 275983 seg 1 f226 -284 CGGAGCACTG >1 YBR018C GAL7 275483 275983 seg 2 f337 -173 CGAAGGACTG >1 YBR018C GAL7 275483 275983 seg 3 f315 -195 CGGACAACTG >2 YBR019C GAL10 278308 278808 seg 1 f171 -339 CGGAGCAGTG >2 YBR019C GAL10 278308 278808 seg 2 r258 -258 CGGAAGACTC >2 YBR019C GAL10 278308 278808 seg 3 f255 -255 TGGAGGGCTG >3 YBR020W GAL1 278377 278977 seg 1 f188 -424 CGGAAGACTC >3 YBR020W GAL1 278377 278977 seg 2 r342 -342 CGGAGCAGTG >3 YBR020W GAL1 278377 278977 seg 3 r426 -426 CGGAGGGCTG >4 YLR081W GAL2 289713 290213 seg 1 f176 -334 CGGATCACTC >5 YML051W GAL80 171094 171594 seg 1 f335 -175 CGGCGCACTC >6 YOR120W GCY1 550612 551112 seg 1 r360 -360 CGGAATAGTC ****************************** Motif #2: (CTCTCCTCCG/CGGAGGAGAG) ****************************** Width (10, 0); Gap [0, 0]; MotifScore 2.390; Segments 10 Blk1 A C G T Con rCon Deg rDeg 1 0.02 0.85 0.11 0.02 C G C G 2 0.30 0.02 0.02 0.67 T A W W 3 0.02 0.66 0.29 0.02 C G S S 4 0.02 0.02 0.02 0.95 T A T A 5 0.02 0.57 0.38 0.02 C G S S 6 0.02 0.66 0.29 0.02 C G S S 7 0.02 0.48 0.02 0.48 T A Y R 8 0.02 0.94 0.02 0.02 C G C G 9 0.02 0.85 0.02 0.12 C G C G 10 0.02 0.11 0.85 0.02 G C G C >1 YBR018C GAL7 275483 275983 seg 1 r275 -275 CAGTGCTCCG >2 YBR019C GAL10 278308 278808 seg 1 r265 -265 CTCTCCTCCG >2 YBR019C GAL10 278308 278808 seg 2 r330 -330 CACTGCTCCG >2 YBR019C GAL10 278308 278808 seg 3 f262 -248 CTGTCGCCCG >3 YBR020W GAL1 278377 278977 seg 1 f261 -351 CACTGCTCCG >3 YBR020W GAL1 278377 278977 seg 2 r433 -433 CTGTCGCCCG >3 YBR020W GAL1 278377 278977 seg 3 f195 -417 CTCTCCTCCC >5 YML051W GAL80 171094 171594 seg 1 f342 -168 CTCTCGCCCG >5 YML051W GAL80 171094 171594 seg 2 f270 -240 CTCTCCCCTG >6 YOR120W GCY1 550612 551112 seg 1 r367 -367 GTCTGCCCCG ****************************** Motif #3: (CGGAGCACTG/CAGTGCTCCG) ****************************** Width (10, 0); Gap [0, 0]; MotifScore 2.376; Segments 11 Blk1 A C G T Con rCon Deg rDeg 1 0.02 0.94 0.01 0.02 C G C G 2 0.02 0.01 0.86 0.11 G C G C 3 0.02 0.35 0.61 0.02 G C S S 4 0.61 0.35 0.01 0.02 A T M K 5 0.27 0.01 0.52 0.19 G C R Y 6 0.02 0.69 0.27 0.02 C G S S 7 0.87 0.01 0.10 0.02 A T A T 8 0.02 0.94 0.01 0.02 C G C G 9 0.02 0.10 0.10 0.78 T A T A 10 0.02 0.35 0.61 0.02 G C S S >1 YBR018C GAL7 275483 275983 seg 1 f226 -284 CGGAGCACTG >1 YBR018C GAL7 275483 275983 seg 2 r172 -172 CGGATCACGG >2 YBR019C GAL10 278308 278808 seg 1 r325 -325 CGCCGCACTG >2 YBR019C GAL10 278308 278808 seg 2 r258 -258 CGGAAGACTC >3 YBR020W GAL1 278377 278977 seg 1 f256 -356 CGCCGCACTG >3 YBR020W GAL1 278377 278977 seg 2 f188 -424 CGGAAGACTC >3 YBR020W GAL1 278377 278977 seg 3 r426 -426 CGGAGGGCTG >4 YLR081W GAL2 289713 290213 seg 1 f176 -334 CGGATCACTC >4 YLR081W GAL2 289713 290213 seg 2 r400 -400 CTCCGCACTG >5 YML051W GAL80 171094 171594 seg 1 f335 -175 CGGCGCACTC >6 YOR120W GCY1 550612 551112 seg 1 f302 -208 CGCAACACCG ****************************** Total time 0:0:3.