AlignACE 4.0 05/13/04 ./AlignACE -i ../../Test/gal4.seq Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 1159542180 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 YBR018C GAL7 275483 275983 #1 YBR019C GAL10 278308 278808 #2 YBR020W GAL1 278377 278977 #3 YLR081W GAL2 289713 290213 #4 YML051W GAL80 171094 171594 #5 YOR120W GCY1 550612 551112 Motif 1 CGGAGCACTGTTGAGCGAAGG 0 221 1 CGGTCAACAGTTGTCCGAGCG 0 304 0 CGCGCCGCACTGCTCCGAACA 1 163 0 CGGTGAAGACGAGGACGCACG 1 212 1 CGGAAGACTCTCCTCCGTGCG 1 227 0 CGGGCGACAGCCCTCCGACGG 1 245 0 CGGATTAGAAGCCGCCGAGCG 1 264 0 CGGATTAGAAGCCGCCGAGCG 2 147 1 CGGGCGACAGCCCTCCGACGG 2 166 1 CGGAAGACTCTCCTCCGTGCG 2 184 1 CGGTGAAGACGAGGACGCACG 2 199 0 CGCGCCGCACTGCTCCGAACA 2 248 1 CGGCGGTCTTTCGTCCGTGCG 3 84 1 CGGCGCAGATATCTCCGCACG 3 99 0 CGGGGCGGATCACTCCGAACC 3 167 1 CGGCGCACTCTCGCCCGAACG 4 328 1 CGGAATAGTCTGCCCCGATTG 5 127 0 *** * * *** ** MAP Score: 66.5155 Motif 2 TTTGGTAAAGTAGAGGGGG 0 132 1 TATGGGCATTATTATGCAG 0 437 1 TGGGGTAATTAATCAGCGA 1 6 0 TGGGGCCAGGTTACTGCCA 1 97 1 TATGGTTATGAAGAGGAAA 1 119 0 ACCGGTGAAGACGAGGACG 1 210 1 TACGGATTAGAAGCCGCCG 1 268 0 TTAGGCTAAGATAATGGGG 1 346 1 TATGGATATGTATATGGTG 1 401 1 TATGGATATGTATATGGTG 2 12 0 TTAGGCTAAGATAATGGGG 2 67 0 TACGGATTAGAAGCCGCCG 2 145 1 ACCGGTGAAGACGAGGACG 2 203 0 TATGGTTATGAAGAGGAAA 2 294 1 TGGGGCCAGGTTACTGCCA 2 316 0 TGGGGTAATTAATCAGCGA 2 407 1 TCCGGGGAAGAACAAGGAA 5 144 1 TCAGGAAAAGACTACGGCA 5 342 1 * ** * ** * ** * MAP Score: 31.7106 Motif 3 TTTGGTAAAGTAGAG 0 132 1 TGTAGCTATGTTCAG 0 380 1 TATGGTTATGAAGAG 1 123 0 TATAGCAATGAGCAG 1 293 1 TGTGGAAATGTAAAG 1 367 0 TATGGATATGTATAT 1 401 1 TATGGATATGTATAT 2 16 0 TGTGGAAATGTAAAG 2 50 1 TATAGCAATGAGCAG 2 124 0 TATGGTTATGAAGAG 2 294 1 TCTTGAGATGGGAAG 3 203 0 TTTGGTGTTGTGAAT 3 390 1 TATTGCAATGGATAT 5 9 1 * *** *** * ** MAP Score: 20.573 Motif 4 CTTCGCTCAACAGTGCTCCGA 0 220 0 CAACTGTTGACCGTGATCCGA 0 312 1 CCTCGCGCCGCACTGCTCCGA 1 166 0 GTGAAGACGAGGACGCACGGA 1 214 1 CGGGCGACAGCCCTCCGACGG 1 245 0 GTACGGATTAGAAGCCGCCGA 1 267 0 GTACGGATTAGAAGCCGCCGA 2 144 1 CGGGCGACAGCCCTCCGACGG 2 166 1 GTGAAGACGAGGACGCACGGA 2 197 0 CCTCGCGCCGCACTGCTCCGA 2 245 1 GTTGCCTCAGGAAGGCACCGG 3 66 1 GCGCAGATATCTCCGCACGGA 3 97 0 GTTCGGAGTGATCCGCCCCGA 3 166 0 AAAATCACACGAGCGCCCGGA 4 180 1 GTTCGGGCGAGAGTGCGCCGG 4 327 0 GACGGGAGTGGAAAGAACGGG 4 479 0 CCCCGGAATAGTCTGCCCCGA 5 130 0 * * * * ** **** MAP Score: 18.5436 Motif 5 TTTTTGGGTTAAGGAAAATGAC 0 261 0 TTATGGGCATTATTATGCAGAG 0 436 1 TTTCTGGGGTAATTAATCAGCG 1 7 0 TTTGTGGGGCCAGGTTACTGCC 1 93 1 TTGTTCGGAGCAGTGCGGCGCG 1 162 1 TCCGACGGAAGACTCTCCTCCG 1 231 0 AAGTACGGATTAGAAGCCGCCG 1 268 0 TTTTTAGGCTAAGATAATGGGG 1 343 1 TTTTTAGGCTAAGATAATGGGG 2 67 0 TCCGACGGAAGACTCTCCTCCG 2 179 1 TTGTTCGGAGCAGTGCGGCGCG 2 248 0 TTTGTGGGGCCAGGTTACTGCC 2 317 0 TTTCTGGGGTAATTAATCAGCG 2 403 1 CTGAACGGCGCAGATATCTCCG 3 103 0 TTTCTAGCAGGAGTATAATGCC 3 230 0 TTGCAGGGGAGAGAAGAAAGGG 4 255 0 TTTACCGGCGCACTCTCGCCCG 4 323 1 ACAATCGGGGCAGACTATTCCG 5 126 1 TTAAGGAGAGCAGCGGTGTGCG 5 296 0 TTACTGGGCGTATAAAACCGGG 5 374 1 ** *** ** *** MAP Score: 18.0454 Motif 6 TATCATGTTGATGCTCTG 0 453 0 TAGGATGATAATGCGATT 1 44 0 TTTTATGGTTATGAAGAG 1 123 0 TGTTGTGGAAATGTAAAG 1 367 0 TATGGTGGTAATGCCATG 1 413 1 TATGGTGGTAATGCCATG 2 1 0 TGTTGTGGAAATGTAAAG 2 47 1 TTTTATGGTTATGAAGAG 2 291 1 TAGGATGATAATGCGATT 2 370 1 TAAAGTGGTTATGCAGCT 2 467 0 TGCAATGGATATGCTTGG 5 12 1 * ***** *** * MAP Score: 15.2766 Motif 7 AGCAACAAGAATATAGCA 0 6 1 AAGGAAAAGTTGTAAATA 0 98 1 AAAATAAAGGGGAAAAAT 0 153 0 ATAGCCAAGCTGAAAATA 0 359 1 AAAAGCAGGTCGGAAATA 0 417 1 AGAAATAAGGCTAAAAAA 1 24 1 ACAATAAAGATTCTACAA 1 148 0 AAAGAGAAGGTTTTTTTA 1 331 1 AAAAGTAAGAATTTTTGA 1 469 1 AAAGAGAAGGTTTTTTTA 2 83 0 ACAATAAAGATTCTACAA 2 266 1 AGAAATAAGGCTAAAAAA 2 390 0 AACGTCAAGGAGAAAAAA 2 577 1 ATGGGAAGGGCTTAACTA 3 193 0 AGAGAGAAGGAGCAAGCA 4 19 1 ATAGTGAAGAAGTTAATA 4 159 0 AGAAGAAAGGGGTATAAA 4 248 0 AGAGTTAAGTTTCAAATA 5 54 0 ACAATGAGGGAGAAAAGA 5 169 0 * ** *** * ** * MAP Score: 14.5582 Motif 8 AACAGTGCTCCGAAGTAT 0 215 0 AACAGTTGTCCGAGCGCT 0 302 0 GACCGTGATCCGAAGGAC 0 320 1 AGCAGTGCGGCGCGAGGC 1 170 1 GGCTGTCGCCCGCTCGGC 1 254 1 AGCAGTTAAGCGTATTAC 1 303 1 AGCAGTTAAGCGTATTAC 2 111 0 GGCTGTCGCCCGCTCGGC 2 160 0 GACTCTCCTCCGTGCGTC 2 189 1 AGCAGTGCGGCGCGAGGC 2 244 0 GGCAGTAACCTGGCCCCA 2 317 1 GGCGGTCTTTCGTCCGTG 3 85 1 GGCAGTATCGGGGCGGAT 3 159 1 GGCAGTGACCGGATTAGC 4 112 0 GGCGCTCGTGTGATTTTC 4 179 0 AGCAGTGATATGTGATGT 4 420 0 GGCATTCACCCGTGTGAC 5 274 1 *** ** *** * * MAP Score: 13.5911 Motif 9 CAAAATAAAGGG 0 160 0 CCAAAAGGAGAG 0 197 0 CCAAAAATAAGG 0 276 1 CCAGAAATAAGG 1 22 1 CGAACAATAAAG 1 157 0 CCAAAGAGAAGG 1 329 1 CCAAAAAAAAAG 1 462 1 CCAAAGAGAAGG 2 91 0 CGAACAATAAAG 2 263 1 CCAGAAATAAGG 2 398 0 CCAACCTAAAGG 4 147 1 CAAAAAAAAAAG 4 393 0 CCAACTATCGAG 4 464 0 CGAACAATCGGG 5 123 1 ***** * **** MAP Score: 13.0348 Motif 10 GCCTTATTTCTGGGGT 1 19 0 TGAAGGTTTGTGGGGC 1 87 1 GCTAAGATAATGGGGC 1 350 1 GCTAAGATAATGGGGC 2 66 0 TGAAGGTTTGTGGGGC 2 329 0 GCCTTATTTCTGGGGT 2 397 1 GGTGCCTTCCTGAGGC 3 69 0 GCAAGCATAGTGGGGC 4 85 1 GCAGACATTTTGAGGT 4 349 0 ** ** ****** MAP Score: 11.9727 Motif 11 GTCCAAAAAGCGCTCGGACAA 0 294 1 GGTTATGAAGAGGAAAAATTG 1 114 0 GGTGAAGACGAGGACGCACGG 1 213 1 GATTAGAAGCCGCCGAGCGGG 1 262 0 GATTAGAAGCCGCCGAGCGGG 2 149 1 GGTGAAGACGAGGACGCACGG 2 198 0 GGTTATGAAGAGGAAAAATTG 2 297 1 TCTCAAGATGGGGAGCAAATG 3 210 1 GGCTAAAATGTGGAGATAGGA 3 324 1 TGCAACAAAGTGCAAGCATAG 4 74 1 TATTACAAAGCGGAAAACTTG 4 223 0 GAGAAGAAAGGGGTATAAATA 4 246 0 GCGAACAATCGGGGCAGACTA 5 122 1 TATGACAATGAGGGAGAAAAG 5 170 0 TCTCAGAAAGGGGTAGAATCA 5 208 1 * * * ** * ** * * MAP Score: 10.9828 Motif 12 CAAAGCAATT 0 186 0 TATAGCCAGT 0 336 0 TAATGCGATT 1 44 0 TATAGCAATG 1 293 1 TAATGCCATG 1 421 1 TAATGCCATG 2 1 0 TATAGCAATG 2 129 0 TAATGCGATT 2 378 1 TAATGCCATT 3 227 0 TATTGCAATG 5 9 1 TAAAGCCAGG 5 42 0 CATAGCAAGG 5 187 1 TAAAGCAATT 5 367 0 ********** MAP Score: 10.9121 Motif 13 AGGATGATAATGCGATTAG 1 42 0 TCTTTATTGTTCGGAGCAG 1 156 1 ACGAGGACGCACGGAGGAG 1 220 1 ATATTGAAGTACGGATTAG 1 277 0 AACATATAAGTAAGATTAG 1 381 1 AACATATAAGTAAGATTAG 2 32 0 ATATTGAAGTACGGATTAG 2 136 1 ACGAGGACGCACGGAGGAG 2 193 0 TCTTTATTGTTCGGAGCAG 2 257 0 AGGATGATAATGCGATTAG 2 371 1 AAAATGTTGAAAGTATTAG 2 486 0 TTTATGACATTTGAATAAG 2 520 0 AATGTGGAGATAGGATAAG 3 330 1 TTGATGATAATTGAATAAG 3 422 0 ATATTGCAGGGGAGAGAAG 4 261 0 TTCCTATGGAGTGTATAAG 5 83 1 ACCTTGCTATGACAATGAG 5 179 0 * ** * **** ** MAP Score: 9.88382 Motif 14 GGTAAAGTAGAGGG 0 135 1 GGAAATATTTATGG 0 428 1 GGAAAAATTGGCAG 1 110 0 GGCTAAGATAATGG 1 349 1 GGAAATGTAAAGAG 1 365 0 GGATATGTATATGG 1 404 1 GGATATGTATATGG 2 14 0 GGAAATGTAAAGAG 2 53 1 GGCTAAGATAATGG 2 69 0 GGAAAAATTGGCAG 2 308 1 GAAAATGTTGAAAG 2 492 0 GGAAAAGACTACGG 5 345 1 ** ***** * ** MAP Score: 9.71892 Motif 15 CGAAGCGCTTCAGTGAAAAAATC 0 73 1 CGGAGCACTGTTGAGCGAAGGCT 0 221 1 CGGACAACTGTTGACCGTGATCC 0 308 1 CGGAGCAGTGCGGCGCGAGGCAC 1 167 1 GGACGCACGGAGGAGAGTCTTCC 1 224 1 CGGAGGGCTGTCGCCCGCTCGGC 1 249 1 CGCCGAGCGGGCGACAGCCCTCC 2 159 1 GGACGCACGGAGGAGAGTCTTCC 2 185 0 CGCCGCACTGCTCCGAACAATAA 2 250 1 CGGCGGTCTTTCGTCCGTGCGGA 3 84 1 CGCCGTTCAGGGGTCCATGTGCC 3 115 1 CGCCCGGACGATGTCTCTGTTTA 4 193 1 CGGCGCACTCTCGCCCGAACGAC 4 328 1 CGGCGAACAATCGGGGCAGACTA 5 120 1 ** ** * * * * * * MAP Score: 9.33008 Motif 16 GAACTCCGCGGCTCGT 0 23 0 TCACTGAAGCGCTTCG 0 73 0 GCACTGTTGAGCGAAG 0 225 1 GCTATGTTCAGTTAGT 0 384 1 TAATTAATCAGCGAAG 1 4 0 GGTTTGTGGGGCCAGG 1 91 1 GCAGTGCGGCGCGAGG 1 171 1 GCTGTCGCCCGCTCGG 1 255 1 GCAATGAGCAGTTAAG 1 297 1 GCAATGAGCAGTTAAG 2 119 0 GCTGTCGCCCGCTCGG 2 161 0 GCAGTGCGGCGCGAGG 2 245 0 GGTTTGTGGGGCCAGG 2 325 0 TAATTAATCAGCGAAG 2 412 1 GGAGTGATCCGCCCCG 3 167 0 GCAGTGACCGGATTAG 4 113 0 GGAATAGTCTGCCCCG 5 131 0 GCAGCGGTGTGCGATT 5 293 0 GCTTTACTGGGCGTAT 5 371 1 *** ** * *** * MAP Score: 9.1799 Motif 17 GAAATGAACTCCGCGGCTCGTGC 0 21 0 CTTCGGAGCACTGTTGAGCGAAG 0 218 1 TCACGGTCAACAGTTGTCCGAGC 0 305 0 GTTCGGAGCAGTGCGGCGCGAGG 1 164 1 GACCGGTGAAGACGAGGACGCAC 1 209 1 GGAGGAGAGTCTTCCGTCGGAGG 1 232 1 GGATTAGAAGCCGCCGAGCGGGC 1 261 0 GGATTAGAAGCCGCCGAGCGGGC 2 148 1 GGAGGAGAGTCTTCCGTCGGAGG 2 177 0 GACCGGTGAAGACGAGGACGCAC 2 200 0 GTTCGGAGCAGTGCGGCGCGAGG 2 245 0 GGGCGGTTGCCTCAGGAAGGCAC 3 61 1 GGCGGTCTTTCGTCCGTGCGGAG 3 85 1 GGCACATGGACCCCTGAACGGCG 3 115 0 TACCGGCGCACTCTCGCCCGAAC 4 325 1 GGTAGAATCAATCTAGCACGCAG 5 219 1 * ** * * * ** ** MAP Score: 7.51069 Motif 18 ACGGTAGCAACAAGAATATAG 0 1 1 CGAATACTACCAATAATATTT 0 111 0 AACATGATAAAAAAAAACAGT 0 462 1 CTCTTCATAACCATAAAAGCT 1 123 1 CTGCTCCGAACAATAAAGATT 1 154 0 AAAGTTCCAAAGAGAAGGTTT 1 323 1 AAAGTTCCAAAGAGAAGGTTT 2 88 0 CTGCTCCGAACAATAAAGATT 2 257 1 CTCTTCATAACCATAAAAGCT 2 288 0 AAAGTATCAACAAAAAATTGT 2 537 1 ATTGTTCAAAAAACAAACATT 3 298 1 CATATATAAACAATCAGTAAT 3 358 1 CAATTCACAACACCAAATTTT 3 386 0 AACATAATAAAAAAAATAATT 3 471 1 AGGTTCAAAAAAAAAAGTTAT 4 389 0 * * ***** ** * MAP Score: 7.20567 Motif 19 GGTCCAAAAA 0 293 1 TGTTCACAAA 0 349 1 GGCTAGCAAA 0 402 1 GGCTAAAAAA 1 32 1 GCCCCACAAA 1 93 0 GCCTAAAAAA 1 342 0 GCCTAAAAAA 2 80 1 GCCCCACAAA 2 329 1 GGCTAAAAAA 2 390 0 TGTTCAAAAA 3 300 1 GGTTCAAAAA 4 399 0 TGTCAACAAA 5 72 1 ********** MAP Score: 6.63681 Motif 20 CTATACTTCGGAGC 0 213 1 TTATTATGCAGAGC 0 445 1 TTAATCAGCGAAGC 1 3 0 TTATGAAGAGGAAA 1 119 0 TTATTGTTCGGAGC 1 159 1 ATATGTTGTGGAAA 1 374 0 ATATGTTGTGGAAA 2 44 1 TTATTGTTCGGAGC 2 259 0 TTATGAAGAGGAAA 2 299 1 TTAATCAGCGAAGC 2 415 1 TCAAGATGGGGAGC 3 212 1 CTAAAATGTGGAGA 3 326 1 TTAGCATTGGAAGA 4 103 0 TTACAAAGCGGAAA 4 228 0 TTAAGGAGAGCAGC 5 304 0 TTAGTAATGAGAGC 5 472 0 *** ** ***** MAP Score: 5.83288 Motif 21 GGCTAAAAAACTA 1 32 1 GGTGAAGACGAGG 1 213 1 GGCTAAGATAATG 1 349 1 GGCTAAGATAATG 2 70 0 GGTGAAGACGAGG 2 206 0 GGTTATGAAGAGG 2 297 1 GGCTAAAAAACTA 2 387 0 GGAGAAAAAACTA 2 585 1 AGCTAAAAATGGG 3 26 1 GGCTAAAATGTGG 3 324 1 ATTGAAAATTTGG 3 382 1 AGAGAAGAAAGGG 4 255 0 GGCGAACAATCGG 5 121 1 GGAGAAAAGACCG 5 166 0 GTATAAAACCGGG 5 383 1 AGCTAAAATTTGG 5 456 1 ******** ** MAP Score: 4.49268 Motif 22 GAGCCTTCGCTCAACAGTGCTC 0 223 0 GGAGCAGTGCGGCGCGAGGCAC 1 168 1 GAGGACGCACGGAGGAGAGTCT 1 222 1 GTCGGAGGGCTGTCGCCCGCTC 1 247 1 TCAGTAATACGCTTAACTGCTC 1 302 0 GTTGTGGAAATGTAAAGAGCCC 1 362 0 GTTGTGGAAATGTAAAGAGCCC 2 48 1 TCAGTAATACGCTTAACTGCTC 2 108 1 GCTGTCGCCCGCTCGGCGGCTT 2 155 0 GACGGAAGACTCTCCTCCGTGC 2 182 1 TGTGCCTCGCGCCGCACTGCTC 2 241 1 GGCGGTTGCCTCAGGAAGGCAC 3 62 1 TAAGAAAATCACACGAGCGCCC 4 176 1 GAGGTCGTTCGGGCGAGAGTGC 4 332 0 GCTGGTCCTTGCCGACCAGCGT 4 435 1 TTCGTCACACGGGTGAATGCCT 5 273 0 * * *** * * ** * MAP Score: 4.20753 Motif 23 GGTTATGAAGAGGAAAAATTG 1 114 0 TAACCATAAAAGCTAGTATTG 1 130 1 GGTGAAGACGAGGACGCACGG 1 213 1 CATTGCTATATTGAAGTACGG 1 282 0 TACTTATATGTTGTGGAAATG 1 372 0 GATATGTATATGGTGGTAATG 1 405 1 TTTTTTTGGATGGACGCAAAG 1 450 0 GATATGTATATGGTGGTAATG 2 6 0 TACTTATATGTTGTGGAAATG 2 39 1 GGTGAAGACGAGGACGCACGG 2 198 0 TAACCATAAAAGCTAGTATTG 2 281 0 GGTTATGAAGAGGAAAAATTG 2 297 1 TTAAGGCAGAAGGCAGTATCG 3 148 1 TGCAACAAAGTGCAAGCATAG 4 74 1 GGGAAGAACAAGGAAGGGCGG 5 148 1 TATGACAATGAGGGAGAAAAG 5 170 0 * * **** ** * * MAP Score: 3.09559 Motif 24 ACGAAATGAACTCCGCGGCTCGTGC 0 21 0 CCGTGATCCGAAGGACTGGCTATAC 0 322 1 ACGGAAGACTCTCCTCCGTGCGTCC 1 224 0 CTGTCGCCCGCTCGGCGGCTTCTAA 1 256 1 CTGTCGCCCGCTCGGCGGCTTCTAA 2 151 0 ACGGAAGACTCTCCTCCGTGCGTCC 2 183 1 CGGACGAAAGACCGCCGGTGCCTTC 3 76 0 TCGGAGTGATCCGCCCCGATACTGC 3 160 0 CAGCAGTGGCAGTGACCGGATTAGC 4 112 0 CGGGCGAGAGTGCGCCGGTAAATGA 4 320 0 CCGGAATAGTCTGCCCCGATTGTTC 5 124 0 AAGAACAAGGAAGGGCGGTCTTTTC 5 151 1 * * * ** *** * * MAP Score: 1.78518 Motif 25 AGTGCGGCGCGAGGCACATCTGC 1 173 1 CACCGGTCGCGTTCCTGAAACGC 1 194 0 ACGAGGACGCACGGAGGAGAGTC 1 220 1 CTTCCGTCGGAGGGCTGTCGCCC 1 242 1 AAGCCGCCGAGCGGGCGACAGCC 1 254 0 AAGCCGCCGAGCGGGCGACAGCC 2 155 1 CTTCCGTCGGAGGGCTGTCGCCC 2 167 0 CACCGGTCGCGTTCCTGAAACGC 2 215 1 CTCGCGCCGCACTGCTCCGAACA 2 246 1 AAAGGGGCGGTTGCCTCAGGAAG 3 57 1 ATCGGGGCGGATCACTCCGAACC 3 165 1 CGCTGGTCGGCAAGGACCAGCAG 4 433 0 ACACCGCTGCTCTCCTTAATTCC 5 299 1 * ** *** ** * * MAP Score: 1.51598 Motif 26 GTCCTTCGGATCACGGT 0 321 0 GCCTCGCGCCGCACTGC 1 171 0 GCCCTCCGACGGAAGAC 1 240 0 GTCGCCCGCTCGGCGGC 2 157 0 GTCTTCCGTCGGAGGGC 2 175 0 GCCTCGCGCCGCACTGC 2 244 1 GACGAAAGACCGCCGGT 3 82 0 GTCTTCAGGTCCAGTGG 4 56 0 GGCGAGAGTGCGCCGGT 4 326 0 GTCACACGGGTGAATGC 5 275 0 * * ** ** **** MAP Score: 0.865516 Motif 27 GCGGCTCGTG 0 22 0 GCGGCGCGAG 1 176 1 GCGACCGGTG 1 207 1 GCGACCGGTG 2 215 0 GCGGCGCGAG 2 246 0 GGGGCGGTTG 3 60 1 ACCGCCGGTG 3 81 0 GCCACTGGAC 4 55 1 GCCACTGCTG 4 127 1 GGCGCTCGTG 4 187 0 TTCGCCGGTG 5 117 0 ACCGCTGCTC 5 301 1 ********** MAP Score: 0.227319